Installation
Using stnmf
requires the installation of other Python packages (dependencies). These can be downloaded and installed automatically using the pip command.
Using pip
The Python package is available on the Python Package Index and is installed from command-line with
pip install stnmf
Using source files
Alternatively, stnmf
can be downloaded and used locally from the working directory in editible form.
Installing the package dependencies is still required.
Either using the following commmand-line prompt or manually (see list below).
git clone https://github.com/gollischlab/STNMF_with_AFHALS.git stnmf
cd stnmf
pip install -e .
Dependencies
python>=3.10
cycler>=0.12.1
matplotlib>=3.7.0
numpy>=1.22.0
scikit-image>=0.22.0
scipy>=1.11.0
shapely>=2.0.0
tqdm>=4.66.1